Manager:
Pieter W. Faber, Ph.D.
Phone: (216) 444-7124
Email: faberp@ccf.org

Scientific Advisor:
Charis Eng, M.D., Ph.D., FACP

Sequencing:
Location: NE5-253
Phone: (216) 444-0974 (Xiaolan)

Illumina array services:
Location: NE5-253
Phone: (216) 444-7124

Illumina-Based Services

1

Gene Expression Services:

A) Whole Genome Gene Expression Experiments.

  • Human-6 / HT-12 and HumanRefSeq8 BeadChips (46,000 and 23,000 features, respectively).
  • Mouse-6 and MouseRefSeq8 BeadChips (46,000 and 23,000 features, respectively).
  • RatRef-12 BeadChip (22,000 features)

B) DASL assay.

  • Illumina's cDNA-mediated Annealing, Selection, extension and Ligation assay (DASL) is designed to generate reproducible profiles from degraded RNAs such as those derived from formalin-fixed, paraffin-embedded (FFPE) tissues (512 - 1536 genes per assay).

SNP Genotyping Services:

C) GoldenGate assay.

  • 96 to 1536 plex SNP genotyping on universal arrays.

D) Infinium Whole Genome Genotyping assay.

  • Human-1M Genotyping BeadChip (over 1,000,000 SNPs + CNV content).
  • Human610-Quad Genotyping BeadChip (550,000 tag SNPs + CNV content).
  • Humancnv370-Quad Genotyping BeadChip (317,000 tagSNPs plus cnv content).
  • Humanexon510S-Duo Genotyping Beadchip (510,000 gene centric SNPs + cnv content).

E) DNA Methylation profiling.

  • GoldenGate methylation profiling
  • Infinium methylation profiling