iTRAQ Quantitative Proteomics software (2009)

• Prepare input files
  • MascotqueryParsev2.pl - convert mascot export files to be used as input
  • convert4800TOFTOFReport.xls - convert ABI 4800 TOF TOF GPS Explorer protein report to be used as input
• R Source code
  • Process_iTRAQ_Data_v1.r
  • Combine_iTRAQ_Datasets_v1.r

• Sample Input Files utilized in programs.
• BM150Qa.csv (559 Kb) sample input file for Process_iTRAQ_Data_v1.r
• BM150Qa.ProtInfo.csv (53 Kb) sample input file for Combine_iTRAQ_Datasets_v1.r